cellpose for Mac
Cellpose is a general-purpose segmentation tool for biological image analysis, whose core purpose is to identify and outline the contours of cells and nuclei in microscopy images.
cellpose — overview
Cellpose is a general-purpose segmentation tool for biological image analysis, whose core purpose is to identify and outline the contours of cells and nuclei in microscopy images. When performing cell counting, morphological measurements, or tracking analysis, manual outlining is both time-consuming and difficult to keep consistent; Cellpose automates this step with algorithms and outputs segmentation results that can be used directly for subsequent quantitative analysis. The software runs via command line, making it suitable for researchers accustomed to scripting and needing to batch-process images, such as laboratory personnel in fields like cell biology and neuroscience. It imposes no stringent restrictions on image types and is commonly used to process fluorescence or brightfield micrographs, helping users quickly convert raw images into analyzable data.
Details
用于细胞和细胞核分割的通用算法
How to install cellpose
- Open Terminal (press ⌘ + Space and type “Terminal”).
- If Homebrew is not installed yet, run the command below first.
- Run this command:
Compared with similar apps
Only public metadata is compared, with no subjective recommendation; see the compare pages for field-by-field comparisons.
| App | Version | License | Architecture | 30-day installs |
|---|---|---|---|---|
| cellpose | 4.2.1.1 | BSD-3-Clause | CLI | 16 |
| baysor | cpp-0.9.0 | MIT | CLI | 20 |
| alevin-fry | v0.19.0 | BSD-3-Clause | CLI | 9 |
| vowpal-wabbit | 9.11.9 | BSD-3-Clause | CLI | 36 |
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